PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.9G055100.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 417aa    MW: 42892.5 Da    PI: 4.7408
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.9G055100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.92.3e-13225276556
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                         + +rrkq+NRe+ArrsR RK a + eLe  v++L  eN++L  +l   +++ 
  Sevir.9G055100.1.p 225 RLQRRKQSNRESARRSRSRKAAHLNELEAQVAQLRVENSSLLRRLADVNQKF 276
                         679**************************************98887777665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.3E-15221285IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.254223278IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.8E-10224277No hitNo description
PfamPF001704.1E-10225274IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.81E-9225274No hitNo description
PfamPF124984.4E-49292409IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    Send to blast
MERVFSVEEI PNPYWAPTQP QAAAAGAVAA PGGGGGGGGG GGAGGAGDEV GAMNRCSSEW  60
YFQKFLEEAV LDSPGPVPGV GRGGGGVGVE AAESKPLGVG AASNAVVDPV EYNAMLKQKL  120
EKDLAAVAMW RASGATPPER PAAGSSLPNV DVSHAGPVNP IGGNVIPVQN KLAGAPGGPS  180
GPQVVQNADM LVKQATSSSS REQSDDDDME GEAETTGNAN PVQQRLQRRK QSNRESARRS  240
RSRKAAHLNE LEAQVAQLRV ENSSLLRRLA DVNQKFNEAA VDNRVLKADV ETLRAKVKMA  300
EDSVKRVTGM NALFPPVSDM SSLSMPFNGS PSDSTSDAAV PVQDDPSSYF ASPSEMGGNG  360
GYMPEIASSA QEDDDLVNAA LAAGKMGRTA SLQRVESLEH LQKRMCGGPA SSGSTS*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004981429.10.0PREDICTED: light-inducible protein CPRF2-like
TrEMBLK4A8560.0K4A856_SETIT; Uncharacterized protein
STRINGSi035062m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP34883878
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.29e-47bZIP family protein